Input | |
File with input data | Text file should contain two columns separated by separating character (see input format type parameter). First column - m/z ratio (mass), second - Intensity. |
Input Files Format | This parameter specify the format of input files: Space separated values, Comma separated values, Tab separated values. |
LDF File | This file contain LDF calculation parameters obtained as result of MSCalcParamLDA module. |
Output | |
Result | Name of output file |
Options | |
Binning percent | This parameter specify the fraction of data in percent that will remain after resampling. |
Smoothing repeats | This parameter specify the number of smoothing operation repeats. |
Smoothing window size | This parameter determine window size for smoothing operation. |
Baseline parameter | This parameter specify the minimal relative mass difference, over which the two neighboring peaks 1 and 2 are to be distinguished for baseline determination. |
Normalization constant | This parameter specify the normalization constant. |
CA125 Level | This parameter define the level of the CA125 marker needed to classify samples for cancer/non-cancer types. |