Protein Disorder Prediction
PDisorder is the program for predicting ordered and disordered regions in protein sequences. Minimum required sequence length is 40.
Combination of Neural Network, Linear Discriminant Function and acute Smoothing Procedure is used for recognition of disordered and ordered regions in proteins.
Two sets of significant attributes: one for Neural Network, and another one for Linear Discriminant Function are selected using automatic LDA procedure, as well as approach based on calculations of chances to be in disordered or ordered regions.
Three windowing procedures are used, called left, right and intermediate. For all windows, attributes are calculated over 31 residues.