Input
Nucleotide sequence	File with the sequence to search for (sequence must not contain gaps, otherwise the motif shall not be found).
Output
Result	Name of the output file.
Strand to Search in	Scan sequence in selected strand(s). In direct strand only - Direct strand will be searched. In reverse strand only - Reverse strand will be searched. In both strands - Both direct and reverse strands will be searched.
String to Search for	The sequence to search for (sequence must not contain gaps, otherwise the motif shall not be found).
Mismatch Limit	Maximal percentage of mismatches.