OligsR


Input
Sequences set Place your Input file in FASTA format.
Packed file Input file is packed file (nucfile, nf).
Output
Result Name of the output file.
Print all oligsPrint all oligs, ignore conditions.
Print oligs by deviationUse the value 3.0 to output 5% of oligos.
Options
FrequencyMost frequent or least frequent:
most frequent (default)
least frequent
Minimal olig length Minimal olig length.
Maximal oligs length Maximal oligs length.
Percents of NOlig have no more # % of 'N', default is 100.
Scan chain Scan target sequence in different chain:
In direct chain only (default)
In reverse chain only
In both chains
Shift in sequenceShift in sequence, default value is 0.
Step in sequence Step in sequence (default value is 1).