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MaliN |
| Input | |
| Sequences set | Place your set file nucleotide sequences in FASTA format |
| Output | |
| Result | Name of the output file |
| Options | |
| Scoring matrix | Select one of the standard pre-defined matrix. |
| Gap Initiation penalty | Gap Initiation penalty in average match units |
| Gap Continuation penalty | Gap Continuation penalty in average match units |
| Match score | Match score, if Single-score scoring chosen (Similarity scoring only) |
| Mismatch penalty | Mismatch penalty, if Single-score scoring chosen |