GenomeMatch

Alignment of two genomes or chromosomes.
Program for quick aligning of procariotic genomes, chromosomes and chromosomal contigs, genomes of mitochondria, organelles, viruses etc. Program finds relatively long similarity regions, which may contain gaps inside. Such regions may overlap each other, i.e. some nucleotides either in query or in target sequences may belong to different alignments.



GenomeMatch description

GenomeMatch parameters