FindTerm


Input
Sequence   Findterm Input file.
Output
Result  Name of the output file.
XML data  Name of the file for graphical output.
Options
Energy threshold value Energy threshold value (default value is -11.0, minimal value is -100, maximal value is 100). Accounts for stem energy, sequence similarity with the known terminators etc.
Work modes Defines one of 2 working modes:
Best terminator - only best terminator at output
All non-overlapping terminators - Output all non-overlapping terminators in both "+" and "-" chains at once, which are not closer than 20 nucleotides to each other.