AddProtein

Input
  Nucleotide Query Sequence   File with Nucleotide Query Sequence.
This should be exactly the same file as for Net-BlastX input.
  NetBlastX result file   File with NetBlastX alignments. !NOTE!NetBlastX must be run with output option set to "Pairwise" (Default) style .
Output
  Result   Designates an output file for the search results.
  String Length   Specify the nucleotide string length in output file.
  Make HTML Output   Make HTML Output.
  Show Blast results   Enabling this option specifies if the Blast alignment results will be added to the end of file.
  Numeration Style   Numeration style for nucleotides in output file.
Three variants are possible:
1. No numeration;
2. To the left of the first nucleotide in a string (Left);
3. Above the each tenth nucleotide in a string (Top).
Options
  Homology threshold   Specifying this parameter, user can discard results with homology percentage lower than set value.
  Process first hit only   Enabling this option restricts the output to the first hit only.